Research   

The group’s ongoing and future research program broadly focuses on the innate immune systems of mosquito disease vectors, and comprises several independent but synergistically interacting projects.

CURRENT DIMOPOULOS GROUP PROJECTS


Introduction
The group’s ongoing and future research program broadly focuses on the innate immune systems of mosquito disease vectors, and comprises several independent but synergistically interacting projects. We are interested in understanding the role and mechanisms of the mosquito’s innate immune system in the defense against human pathogens such as Plasmodium and the Dengue virus. A major focus is concentrated on Anopheles gambiae anti-Plasmodium defense systems that. Towards this, we have contributed with several pioneering discoveries. Our mission is to characterize the defense mechanisms employed by mosquito vectors against human pathogens. Our competitive advantage derives from a unique blend of core competencies in molecular entomology, innate immunity and functional genomics, as well as the access to state-of-the-art research infrastructure at the Johns Hopkins Malaria Research Institute. The long-term goal of our research program is to broaden the basic knowledge of this field and provide new tools for the development of vector borne disease control strategies.

Development of mosquito gene expression analysis tools
The majority of our research projects involve high throughput transcription analyses for the study of infection responsive processes and immune response regulation. My group has acquired extensive expertise on microarray-based gene expression methodology, and developed the first full genome microarrays for Anopheles gambiae, Aedes aegypti, Culex pipiens and Plasmodium berghei. These genomics tools have been instrumental in a variety of project including the dissection of A. gambiae responses to Plasmodium infection, the annotation and basic characterization of the Ae. aegypti and P. pipiens transcriptomes, the study of C. pipiens responses to West Niles virus infection, and Ae. aegypti responses to dengue virus infection. We have also performed studies on Plasmodium gene regulation (Dong et al., 2006b; Mair et al., 2006; Nene et al., 2007). We have also contributed towards the development of novel bioinformatics tools for the analysis of microarray data (Heard et al., 2005).
FUTURE DIRECTIONS: My group is continuously monitoring the development and evaluating the use of new functional genomics / post genomics technologies for our studies. Our Agilent Technologies-based mosquito microarrays provide cost effective and competitive performance for the next 2-3 years. High throughput sequencing-based gene expression assays are then expected to become a more powerful approach and will obviously be adopted for our studies. The current mosquito microarrays will continually be updated when the mosquito genome sequences are re-annotated in order to ensure representation of the most current transcript annotations.

The malaria parasite Plasmodium has a complex life cycle in the vector mosquito that involve several developmental transitions, interactions and invasion of epithelial tissues and evasion of the mosquitos' immune system. Gametocytes (GC) are ingested with an infectious blood meal and fertilize in the mosquito midgut to develop into a zygote which later transforms into a motile ookinetes (OK). The ookinetes will invade the midgut epithelium through a specific mechanism to reach the basal side where they develop into oocysts (OC). Thousands of sporozoites (S) will develop within the oocysts and disperse throughout the mosquito’s' hemolymph. From there the sporozoites will invade the salivary glands in which they can remain for weeks, prior to transmission to a new host. Salivary gland invasion also appears to be mediated by specific interaction.




Relationships between An. gambiae immune defenses against different Plasmodium species.
Most studies addressing An. gambiae responses to Plasmodium infection have utilized the rodent Plasmodium berghei model system, which is more amenable to experimental manipulation than is the human parasite Plasmodium falciparum. However, An. gambiae is not the natural vector of the P. berghei parasite that differ significantly from the human pathogen with regard to a variety of biological processes (Dong et al., 2006b). In order to address potential differences in mosquito defense responses to the two parasite species, and thereby validate the usefulness of the rodent model, we conducted a study were the transcriptional immune responses to infection of the An. gambiae gut was compared between the two parasite species. The results showed remarkably diverse responses to infection with the two parasite species that can be attributed to differences in infection level and in the biology of interaction between the two parasite species and the mosquito. The smaller number of induced putative immune genes upon P. berghei infection may indicate that the mosquito’s immune surveillance system is more capable of sensing P. falciparum, or P. berghei may in some way suppress the mosquito’s immune response, and that could partly explain the significantly higher infection levels of the rodent parasite in An. gambiae. Assays have also been conducted to address the mosquito responses to malaria infected blood in absence of parasite stages that infect mosquito tissues, and showed broad effects on gene regulation, that indicates the extensive qualitative differences between infected and non-infected blood (Becker et al., 2004, Lim et al., 2005). The capacity to mount an immune response to infected blood, in the absence of Plasmodium invasion of the mosquito gut, is likely beneficial in controlling Plasmodium infection since it would allow for enrichment of anti-Plasmodium factors prior to epithelial invasion. These experiments generated a wealth of information on novel putative anti-Plasmodium factors that can be pursued for functional dissection. This analysis was also extended to the level of gene function for twelve selected immune genes that were assessed for effect on infection with both parasite species through RNAi gene silencing methodology. Seven of these genes were found to influence mosquito resistance to both parasite species while two genes were specifically involved in defense against P. falciparum and another two were more specific for P. berghei. This study showed that the mosquito is utilizing both parasite species-specific and universal defense mechanisms to combat Plasmodium (Dong et al., 2006b).
FUTURE DIRECTIONS: The discovery of significant differences between infection responses to the two parasite species have prompted us to exclusively use the human pathogen P. falciparum in our ongoing and future studies. We are now addressing the immune system and anti-Plasmodium responses of natural field mosquitoes and have established collaboration with a research group in Cameroon to initially study the differences in immune gene expression between lab and field mosquitoes, and between different field mosquito populations.

                  

Relationships between the anti-bacterial and anti-Plasmodium defense systems and functional versatility of anti-Plasmodium factors.
The mosquito’s immune system is most likely predominantly devoted to combating the bacterial and fungal pathogens that are present in its external environment and intestinal flora, and it was until recently unclear whether defense mechanisms have evolved that are specific for Plasmodium (Dong et al., 2006b). One can argue that the mosquito’s immune surveillance system and antimicrobial effectors have to cope with a particularly broad spectrum of pathogens, including the Plasmodium parasite, as a result of its complex life style and diverse ecological niches. To address the relationships between the transcriptional immune responses to Plasmodium and bacterial immune challenges, we implemented a study that compared the gene expression in mosquitoes injected with Escherichia coli and Staphylococcus aureus to Plasmodium-infected mosquitoes. This study showed a significant overlap between the mosquito’s response to bacteria and Plasmodium infection and the bacteria infection-responsive transcripts included eight anti-Plasmodium genes. This observation supported the hypothesis that the mosquito is utilizing some of the same immune pathways and mechanisms for defense against these two classes of pathogen. RNAi gene silencing assays were also conducted to address potential overlaps in anti-Plasmodium and antibacterial gene function; this study showed that the genes displaying anti-Plasmodium activity also influenced the mosquito’s resistance to bacterial infection, while several genes with an effect on resistance to bacterial infection could not influence Plasmodium development. These findings suggest the mosquito is mainly employing its antimicrobial defense system in the fight against the malaria parasite (Dong et al., 2006b). Although certain immune gene allele frequencies have been correlated with Plasmodium exposure in the field, there is little reason to believe that the mosquito would have undergone major adaptations to the malaria parasite and evolved highly specific anti-Plasmodium defense mechanisms (Luckhart et al., 2003, Morlais et al., 2004).

                 
                                (Mosquito breeding site in the field)

In order to further address the role of the mosquito’s endogenous bacterial flora in a potential priming of the immune system, we used antibiotic-treatment to generate “microorganism-free” mosquitoes and tested these for permissiveness to Plasmodium infection. P. falciparum infection was 4- to 5-fold higher in bacteria-free compared to septic An. gambiae, suggesting that the bacteria flora of mosquitoes can in some way influence its susceptibility to Plasmodium and hence its vectorial capacity. Microarray gene expression assays were also used to investigate the effect of the mosquito microbial flora on immune gene expression by comparing antibiotic-treated to non-treated adult female mosquitoes. These assays showed that the endogenous microbial flora was responsible for a significant level of basal immune gene expression, some of which was likely to influence the mosquito’s susceptibility to Plasmodium. Other experiments have shown that the bacteria in the mosquito gut also exert a direct anti-Plasmodium activity which, however, does not explain the large difference in susceptibility between antibiotic-treated and non-treated mosquitoes (Dimopoulos group, unpublished data).
We know from studies in Drosophila that the insect innate immune responses to bacterial infection involve the activation of the intracellular immune signaling pathways Toll and Imd, that are highly conserved throughout insect phyla (Waterhouse et al., 2007). In order to address the implication of these pathways in the defense against P. falciparum a RNAi gene silencing strategy was employed that targeted the negative regulators Cactus and Caspar to activate the Toll and Imd pathways, respectively, upon parasite infection (Meister et al., 2005, Frolet et al., 2006, Kim et al., 2006). Both pathways were capable of controlling susceptibility to infection and activation of the Imd pathway had the strongest effect with a ~90% reduction in P. falciparum infection level (Dimopoulos group, unpublished data). This finding further support the extensive overlaps between the mosquito’s antibacterial and anti-Plasmodium defense systems. We pursued the analysis further to address other immune defense reactions such as melanization, which is a major Plasmodium killing mechanism in refractory mosquitoes. We used a Sephadex bead melanization assay to test the implication of various immune genes in the melanization mechanism. These experiments showed that the RNAi –mediated silencing of the TEP1 and LRIM1 genes, which encode proteins known to mediate Plasmodium killing in malaria-susceptible mosquitoes, significantly compromised the ability of mosquitoes to melanize the beads. In contrast, silencing of two Plasmodium protective c-type lectins, CTL4 and CTLMA2, did not affect bead melanization (Osta et al., 2004; Blandin et al.,2004). This data suggest that the anti-Plasmodium factors have multiple functions, as determinants of both Plasmodium and bacteria killing as well as melanization of the parasite and other foreign bodies, while the Plasmodium protective factors are specifically utilized by the parasite for evasion of mosquito defense mechanisms (Warr et al., 2006).
FUTURE DIRECTIONS: Our working hypothesis is that the presence of bacteria and fungi in the mosquito primes or activates immune activity against Plasmodium in addition to having a direct effect on parasite development in the mosquito gut. Consequently, the mosquito’s anti-Plasmodium defense system is largely shaped by its microbial exposure in nature, which is continuous, in contrast to the relatively low exposure rate to Plasmodium. Current and future projects aim at the identification of the mechanism(s) and stage(s) at which the presence of bacteria negatively impacts upon the development of malaria parasites. We have initiated the functional characterization of some of the bacteria induced immune genes using RNAi gene silencing and other assays to address their specific role in defense (Dimopoulos group, unpublished data). We will also address the mosquito’s microbial exposure in nature since it is likely to vary significantly between different ecological niches and thereby be responsible for some of the differences in vectorial capacity between different mosquito populations.


Molecular characterization of the hyper-variable pattern recognition receptor AgDscam function in anti-Plasmodium defense
The innate immune system of the mosquito, unlike that of vertebrates, appears to lack the capacity to transiently adapt its pattern recognition repertoire toward the recognition of specific pathogens or to produce immunological memory. Instead, it relies on the limited diversity of its repertoire of ~130 germ line-encoded pattern recognition receptors (Waterhouse et al., 2007). Malaria transmission in nature involves a variety of mosquito populations and parasite strains that differ in their genetic makeup. This variability complicates the development of malaria control strategies based on transgenic expression of anti-Plasmodium factors in vector mosquitoes, since their parasite-killing activity may vary depending on parasite strain- and species-specific differences (Aguilar et al., 2005). A broad-spectrum anti-Plasmodium factor would therefore be preferred for use in such control strategies. One of these recently identified anti-Plasmodium factors is the Down syndrome cell adhesion molecule (Dscam). Like its D. melanogaster ortholog, Dscam in Anopheles gambiae (AgDscam) possesses 82 alternatively spliced Ig (immunoglobulin) domain exons, which have the potential for generating 31,920 alternative splice forms with different interaction specificities. We have shown that AgDscam is an essential hypervariable receptor of the Anopheles gambiae immune surveillance system, demonstrating phenotypic plasticity in response to different spectra of pathogen exposure. We have shown that AgDscam produces splice form repertoires that are pathogen challenge-specific in the sense that they are enriched with receptor molecules having increased affinity and defense specificity for the eliciting pathogen (Dong et al., 2006a; Watson et al., 2005). We have also shown that AgDscam splicing is regulated by the Toll and Imd immune pathways (Dimopoulos group, unpublished data). AgDscam’s broad range of anti-pathogen activity renders it a particularly interesting candidate for the development of anti-Plasmodium control strategies based on transgenic expression in mosquitoes; it has a high probability to display activity against a variety of Plasmodium strains and species, and thereby overcome the constraints of the more “specific” anti-Plasmodium factors in the field where diversity is large.
FUTURE DIRECTIONS: A better understanding of AgDscam’s anti-Plasmodium activity with regard to its infection-stage specificity, splice form specificity, and immune-related regulation are the first essential steps towards the complete dissection of its biology, which can permit the development of control strategies based on this gene. We are currently pursuing several studies that aim at a detailed understanding of AgDscam function in anti-Plasmodium defense; we have shown that AgDscam is capable of associating with Plasmodium in the mosquito gut epithelium (Fig. 1) and are now focusing on the splice form specificity of this association (Dimopoulos group, unpublished data). We are also addressing the roles of the Toll and Imd immune signaling pathways in regulating AgDscam splicing further, and its potential implication in killing the later sporozoite stage plasmodia. [Figure 1: Confocal microscopy images of ookinetes in the gut epithelium. Samples have been DAPI-stained and subjected to immunohistochemical analysis using the anti-Pfs25 and AgDscam antibodies. The AgDscam pre-immune serum produced no detectable staining of the ookinetes (not shown).]

Molecular characterization of the Imd pathway mediated resistance to P. falciparum
The microarray based expression analyses on mosquito responses to Plasmodium infection, in conjunction with the RNAi-based screens for anti-Plasmodium genes, provided hints that the Imd pathway is a major player in the defense against P. falciparum. We have shown that transient activation of the Imd pathway regulated transcription factor Rel2 will result in resistance to P. falciparum in three diverse malaria vector species. We have also identified some of the effectors that are mediating the Imd pathway’s anti-Plasmodium activity, and are currently focusing on the dissection of this defense system through transgenic methodologies and functional assays.
FUTURE DIRECTIONS: We have initiated projects that will address the suitability of the Imd pathway anti-Plasmodium defenses for the development of malaria control strategies based on genetically modified mosquitoes.


The Aedes aegypti anti viral defense system
The molecular biology of Dengue virus – mosquito interaction is largely unknown. We have made use of our A. aegypti genome microarrays in conjunction with other functional genomics tools to study the mosquito’s responses to infection with the Dengue virus (Nene et al., 2007). A comparison of gene expression between non-infected and Dengue (DENV-2) virus infected mosquitoes, at the stage when the virus spreads from the mosquito gut to other tissues, identified 240 up-regulated and 192 down-regulated genes in the non-gut tissues and 28 up-regulated and 35 down-regulated genes in the gut tissue. A significant proportion of these genes have predicted functions in the mosquito’s innate immune system with a particular bias towards components of the Toll immune signaling pathway. The negative regulator Cactus was down-regulated while several pattern recognition receptors, signaling modulation and transduction factors and effector molecules were up-regulated. This suggested implication of the Toll pathway in the anti-Dengue defense. To address this hypothesis at the functional level, we tested the impact of Toll pathway activation, through RNAi silencing of the Cactus gene, on virus infection in the gut according to Frolet et al., 2006. This lead to an approximately four-fold decrease in infection level compare to the GFP dsRNA treated mosquitoes (Xi et al., 2008). Hence, the A. aegypti Toll pathway appears to play a major role in defending the mosquito against Dengue.
FUTURE DIRECTIONS: Current and future experiments focus on the dissection of this anti-Dengue immune response through gene silencing of other genes that show regulation upon infection and a determination of the temporal and spatial specificity of virus clearance in the mosquito. Insect immunity to viruses is poorly described and these studies will therefore contribute significantly to the field and also provide potential tools for the development of dengue control strategies.


Molecular analysis of photic inhibition of blood-feeding in Anopheles gambiae
Anopheles gambiae mosquitoes exhibit an endophilic, nocturnal blood feeding behavior. Despite the importance of light as a regulator of malaria transmission, our knowledge on the molecular interactions between environmental cues, the circadian oscillators and the host seeking and feeding systems of the Anopheles mosquitoes is limited. We have shown that the blood feeding behavior of mosquitoes is under circadian control and can be modulated by light pulses, both in a clock dependent and in an independent manner. Short light pulses (~2-5 min) in the dark phase can inhibit the blood-feeding propensity of mosquitoes momentarily in a clock independent manner, while longer durations of light stimulation (~1-2 h) can induce a phase advance in blood-feeding propensity in a clock dependent manner. The temporary feeding inhibition after short light pulses may reflect a masking effect of light, an unknown mechanism which is known to superimpose on the true circadian regulation. Nonetheless, the shorter light pulses resulted in the differential regulation of a variety of genes including those implicated in the circadian control, suggesting that light induced masking effects also involve clock components. Light pulses (both short and long) also regulated genes implicated in feeding as well as different physiological processes like metabolism, transport, immunity and protease digestions. RNAi-mediated gene silencing assays of the light pulse regulated circadian factors timeless, cryptochrome and three takeout homologues significantly up-regulated the mosquito's blood-feeding propensity. In contrast, gene silencing of light pulse regulated olfactory factors down-regulated the mosquito's propensity to feed on blood. Our study show that the mosquito’s feeding behavior is under circadian control. Long and short light pulses can induce inhibition of blood-feeding through circadian and unknown mechanisms, respectively, that involve the chemosensory system (Das and Dimopoulos, 2008).
FUTURE DIRECTIONS: We are interested in gaining a better understanding of how environmental cues can influence mosquito behavioral attributes that are important for disease transmission.


COLLABORATIONS

We are pursuing collaborations with:
- Dr. Mike Strand on An. gambiae hemocyte function in immunity.
- Dr. Bruce Christensen on Ae. aegypti responses to filarial infection.
- Dr. Alexander Raikhel on Ae. aegypti immune response regulation.
- Dr. Mariano Garcia Blanco on dengue host and restriction factors.
- Dr. Martin Hibbard on immune responses to dengue infection.
- Dr. Andy Waters and Dr. Gunnar Mair on Plasmodium gene regulation.
- Dr. Nirbhay Kumar on An. gambiae responses to blood stage Plasmodium.
- The Culex pipiens genome sequencing consortium.

FUNDING

NIH/NIAID
Ellison Medical Foundation
WHO-TDR
NSF
ASM
A STAR
Johns Hopkins Malaria Research Institute
Johns Hopkins School of Public Health
 

  Up